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Mactan-Cebu International Airport to Kota Kinabalu International Airport flight

Explore the cheapest one-way and round-trip flights from Mactan-Cebu International Airport to Kota Kinabalu International Airport over the next 90 days, with one-way fares from HK$894 and round-trip from HK$1,736. Based on Trip.com's latest 7-day flight data.

    • Cheapest
      CEB 10:30 PM
      19h 50m
      1 stop
      BKI 6:20 PM
      Cebu - Kota Kinabalu | Sun, Nov 29 | Philippines AirAsia
      HK$894 HK$1,163
      23% off
      23% off
      HK$1,163 HK$894
    • CEB 10:55 PM
      19h 25m
      1 stop
      BKI 6:20 PM
      Cebu - Kota Kinabalu | Tue, Dec 8 | Cebu Pacific
      HK$919 HK$1,163
      21% off
      21% off
      HK$1,163 HK$919
    • CEB 6:25 AM
      11h 55m
      1 stop
      BKI 6:20 PM
      Cebu - Kota Kinabalu | Mon, Dec 14 | Philippines AirAsia
      HK$921 HK$1,163
      21% off
      21% off
      HK$1,163 HK$921
    • CEB 10:20 PM
      20h
      1 stop
      BKI 6:20 PM
      Cebu - Kota Kinabalu | Thu, Nov 12 | Cebu Pacific
      HK$921
      21% off
      HK$1,163 HK$921
    • CEB 6:25 AM
      11h 55m
      1 stop
      BKI 6:20 PM
      Cebu - Kota Kinabalu | Mon, Dec 7 | Philippines AirAsia
      HK$922
      21% off
      HK$1,163 HK$922
    • CEB 10:30 PM
      19h 50m
      1 stop
      BKI 6:20 PM
      Cebu - Kota Kinabalu | Tue, Dec 8 | Philippines AirAsia
      HK$922
      21% off
      HK$1,163 HK$922
    • CEB 10:30 PM
      19h 50m
      1 stop
      BKI 6:20 PM
      Cebu - Kota Kinabalu | Sun, Dec 13 | Philippines AirAsia
      HK$922
      21% off
      HK$1,163 HK$922
    • CEB 10:30 PM
      19h 50m
      1 stop
      BKI 6:20 PM
      Cebu - Kota Kinabalu | Thu, Dec 3 | Philippines AirAsia
      HK$923
      21% off
      HK$1,163 HK$923
    • CEB 10:30 PM
      19h 50m
      1 stop
      BKI 6:20 PM
      Cebu - Kota Kinabalu | Thu, Dec 10 | Philippines AirAsia
      HK$923
      21% off
      HK$1,163 HK$923
    • CEB 1:00 PM
      17h 25m
      1 stop
      BKI 2:00 PM
      Cebu - Kota Kinabalu | Thu, Oct 29 | Normal Airline
      Find more flights
      Find more flights
    • CEB 6:45 AM
      11h 35m
      1 stop
      BKI 6:20 PM
      Cebu - Kota Kinabalu | Mon, Nov 9 | Cebu Pacific
      BKI 7:05 PM
      10h 25m
      1 stop
      CEB 5:30 AM
      Kota Kinabalu - Cebu | Thu, Nov 12 | Philippines AirAsia
      HK$1,736 HK$2,484
      30% off
      30% off
      HK$2,484 HK$1,736
    • CEB 6:25 AM
      11h 55m
      1 stop
      BKI 6:20 PM
      Cebu - Kota Kinabalu | Sat, Oct 31 | Philippines AirAsia
      BKI 7:05 PM
      27h
      1 stop
      CEB 10:05 PM
      Kota Kinabalu - Cebu | Tue, Nov 3 | Philippines AirAsia
      HK$1,794 HK$2,484
      28% off
      28% off
      HK$2,484 HK$1,794
    • CEB 2:15 AM
      16h 5m
      1 stop
      BKI 6:20 PM
      Cebu - Kota Kinabalu | Sat, Oct 31 | Cebu Pacific
      BKI 7:05 PM
      15h
      1 stop
      CEB 10:05 AM
      Kota Kinabalu - Cebu | Tue, Nov 3 | Philippines AirAsia
      HK$1,808 HK$2,484
      27% off
      27% off
      HK$2,484 HK$1,808
    • CEB 6:25 AM
      11h 55m
      1 stop
      BKI 6:20 PM
      Cebu - Kota Kinabalu | Tue, Dec 8 | Philippines AirAsia
      BKI 7:05 PM
      27h
      1 stop
      CEB 10:05 PM
      Kota Kinabalu - Cebu | Sat, Dec 12 | Philippines AirAsia
      HK$1,854
      25% off
      HK$2,484 HK$1,854
    • CEB 1:35 AM
      16h 45m
      1 stop
      BKI 6:20 PM
      Cebu - Kota Kinabalu | Tue, Dec 8 | Cebu Pacific
      BKI 7:05 PM
      27h 5m
      1 stop
      CEB 10:10 PM
      Kota Kinabalu - Cebu | Sat, Dec 12 | Philippines AirAsia
      HK$1,887
      24% off
      HK$2,484 HK$1,887
    • CEB 6:25 AM
      11h 55m
      1 stop
      BKI 6:20 PM
      Cebu - Kota Kinabalu | Sat, Nov 28 | Philippines AirAsia
      BKI 7:05 PM
      10h 50m
      1 stop
      CEB 5:55 AM
      Kota Kinabalu - Cebu | Mon, Nov 30 | Philippines AirAsia
      HK$1,899
      24% off
      HK$2,484 HK$1,899
    • CEB 6:25 AM
      11h 55m
      1 stop
      BKI 6:20 PM
      Cebu - Kota Kinabalu | Thu, Nov 26 | Philippines AirAsia
      BKI 7:05 PM
      24h 35m
      1 stop
      CEB 7:40 PM
      Kota Kinabalu - Cebu | Thu, Dec 3 | Philippines AirAsia
      HK$1,915
      23% off
      HK$2,484 HK$1,915
    • CEB 6:25 AM
      11h 55m
      1 stop
      BKI 6:20 PM
      Cebu - Kota Kinabalu | Tue, Dec 1 | Philippines AirAsia
      BKI 7:05 PM
      10h 50m
      1 stop
      CEB 5:55 AM
      Kota Kinabalu - Cebu | Sat, Dec 5 | Philippines AirAsia
      HK$1,918
      23% off
      HK$2,484 HK$1,918
    • CEB 10:30 PM
      19h 50m
      1 stop
      BKI 6:20 PM
      Cebu - Kota Kinabalu | Wed, Dec 9 | Philippines AirAsia
      BKI 7:05 PM
      27h
      1 stop
      CEB 10:05 PM
      Kota Kinabalu - Cebu | Sat, Dec 12 | Philippines AirAsia
      HK$1,951
      21% off
      HK$2,484 HK$1,951
    • CEB 1:00 PM
      17h 25m
      1 stop
      BKI 2:00 PM
      Cebu - Kota Kinabalu | Thu, Oct 29 | Normal Airline
      BKI 3:00 PM
      6h
      Nonstop
      CEB 4:00 PM
      Kota Kinabalu - Cebu | Sat, Oct 31 | Normal Airline
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    • CEB 10:35 AM
      7h 45m
      1 stop
      BKI 6:20 PM
      Cebu - Kota Kinabalu | Mon, Dec 14 | Philippines AirAsia
      HK$965 HK$1,579
      39% off
      39% off
      HK$1,579 HK$965
    • CEB 10:35 AM
      7h 45m
      1 stop
      BKI 6:20 PM
      Cebu - Kota Kinabalu | Wed, Dec 2 | Philippines AirAsia
      HK$966 HK$1,579
      39% off
      39% off
      HK$1,579 HK$966
    • CEB 10:35 AM
      7h 45m
      1 stop
      BKI 6:20 PM
      Cebu - Kota Kinabalu | Wed, Dec 16 | Philippines AirAsia
      HK$977 HK$1,579
      38% off
      38% off
      HK$1,579 HK$977
    • CEB 10:35 AM
      7h 45m
      1 stop
      BKI 6:20 PM
      Cebu - Kota Kinabalu | Sun, Nov 1 | Philippines AirAsia
      HK$990
      37% off
      HK$1,579 HK$990
    • CEB 10:35 AM
      7h 45m
      1 stop
      BKI 6:20 PM
      Cebu - Kota Kinabalu | Wed, Dec 9 | Philippines AirAsia
      HK$997
      37% off
      HK$1,579 HK$997
    • CEB 10:35 AM
      7h 45m
      1 stop
      BKI 6:20 PM
      Cebu - Kota Kinabalu | Wed, Nov 25 | Philippines AirAsia
      HK$1,004
      36% off
      HK$1,579 HK$1,004
    • CEB 10:35 AM
      7h 45m
      1 stop
      BKI 6:20 PM
      Cebu - Kota Kinabalu | Wed, Nov 11 | Philippines AirAsia
      HK$1,006
      36% off
      HK$1,579 HK$1,006
    • CEB 10:35 AM
      7h 45m
      1 stop
      BKI 6:20 PM
      Cebu - Kota Kinabalu | Mon, Nov 23 | Philippines AirAsia
      HK$1,012
      36% off
      HK$1,579 HK$1,012
    • CEB 10:35 AM
      7h 45m
      1 stop
      BKI 6:20 PM
      Cebu - Kota Kinabalu | Mon, Dec 7 | Philippines AirAsia
      HK$1,042
      34% off
      HK$1,579 HK$1,042
    • CEB 1:00 PM
      17h 25m
      1 stop
      BKI 2:00 PM
      Cebu - Kota Kinabalu | Thu, Oct 29 | Normal Airline
      Find more flights
      Find more flights
    • CEB 10:35 AM
      7h 45m
      1 stop
      BKI 6:20 PM
      Cebu - Kota Kinabalu | Sun, Nov 1 | Philippines AirAsia
      HK$990 HK$2,860
      65% off
      65% off
      HK$2,860 HK$990
    • CEB 10:35 AM
      7h 45m
      1 stop
      BKI 6:20 PM
      Cebu - Kota Kinabalu | Mon, Nov 2 | Philippines AirAsia
      HK$1,143 HK$2,860
      60% off
      60% off
      HK$2,860 HK$1,143
    • CEB 10:35 AM
      7h 45m
      1 stop
      BKI 6:20 PM
      Cebu - Kota Kinabalu | Wed, Oct 28 | Philippines AirAsia
      HK$1,341 HK$2,860
      53% off
      53% off
      HK$2,860 HK$1,341
    • CEB 10:35 AM
      7h 45m
      1 stop
      BKI 6:20 PM
      Cebu - Kota Kinabalu | Fri, Oct 30 | Philippines AirAsia
      HK$1,417
      50% off
      HK$2,860 HK$1,417
    • CEB 2:00 PM
      10h 55m
      1 stop
      BKI 12:55 AM
      Cebu - Kota Kinabalu | Tue, Nov 3 | Malaysia Airlines
      HK$1,612
      44% off
      HK$2,860 HK$1,612
    • CEB 7:10 AM
      11h 50m
      1 stop
      BKI 7:00 PM
      Cebu - Kota Kinabalu | Mon, Nov 2 | Scoot
      HK$1,825
      36% off
      HK$2,860 HK$1,825
    • CEB 7:10 AM
      11h 50m
      1 stop
      BKI 7:00 PM
      Cebu - Kota Kinabalu | Fri, Oct 30 | Scoot
      HK$1,832
      36% off
      HK$2,860 HK$1,832
    • CEB 2:55 PM
      10h
      1 stop
      BKI 12:55 AM
      Cebu - Kota Kinabalu | Sat, Oct 31 | Malaysia Airlines
      HK$2,252
      21% off
      HK$2,860 HK$2,252
    • CEB 2:55 PM
      10h
      1 stop
      BKI 12:55 AM
      Cebu - Kota Kinabalu | Wed, Oct 28 | Malaysia Airlines
      HK$2,288
      20% off
      HK$2,860 HK$2,288
    • CEB 1:00 PM
      17h 25m
      1 stop
      BKI 2:00 PM
      Cebu - Kota Kinabalu | Thu, Oct 29 | Normal Airline
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    • CEB 11:15 AM
      7h 5m
      1 stop
      BKI 6:20 PM
      Cebu - Kota Kinabalu | Wed, Nov 11 | Philippine Airlines
      HK$1,256 HK$2,977
      57% off
      57% off
      HK$2,977 HK$1,256
    • CEB 11:15 AM
      7h 5m
      1 stop
      BKI 6:20 PM
      Cebu - Kota Kinabalu | Mon, Nov 30 | Philippine Airlines
      HK$1,361 HK$2,977
      54% off
      54% off
      HK$2,977 HK$1,361
    • CEB 11:15 AM
      7h 5m
      1 stop
      BKI 6:20 PM
      Cebu - Kota Kinabalu | Sun, Nov 1 | Philippine Airlines
      HK$1,582 HK$2,977
      47% off
      47% off
      HK$2,977 HK$1,582
    • CEB 11:15 AM
      7h 5m
      1 stop
      BKI 6:20 PM
      Cebu - Kota Kinabalu | Sun, Nov 29 | Philippine Airlines
      HK$1,591
      47% off
      HK$2,977 HK$1,591
    • CEB 11:15 AM
      7h 5m
      1 stop
      BKI 6:20 PM
      Cebu - Kota Kinabalu | Sun, Nov 15 | Philippine Airlines
      HK$1,624
      45% off
      HK$2,977 HK$1,624
    • CEB 11:15 AM
      7h 5m
      1 stop
      BKI 6:20 PM
      Cebu - Kota Kinabalu | Sun, Dec 6 | Philippine Airlines
      HK$1,639
      45% off
      HK$2,977 HK$1,639
    • CEB 11:15 AM
      7h 5m
      1 stop
      BKI 6:20 PM
      Cebu - Kota Kinabalu | Sun, Dec 13 | Philippine Airlines
      HK$1,707
      43% off
      HK$2,977 HK$1,707
    • CEB 11:15 AM
      7h 5m
      1 stop
      BKI 6:20 PM
      Cebu - Kota Kinabalu | Mon, Dec 28 | Philippine Airlines
      HK$1,744
      41% off
      HK$2,977 HK$1,744
    • CEB 11:15 AM
      7h 5m
      1 stop
      BKI 6:20 PM
      Cebu - Kota Kinabalu | Wed, Dec 23 | Philippine Airlines
      HK$1,761
      41% off
      HK$2,977 HK$1,761
    • CEB 1:00 PM
      17h 25m
      1 stop
      BKI 2:00 PM
      Cebu - Kota Kinabalu | Thu, Oct 29 | Normal Airline
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Displayed flight fares from Cebu to Kota Kinabalu are based on average prices across airlines for the next 3 months, according to the latest Trip.com database.

Which airline offers the cheapest flights from Mactan-Cebu International Airport to Kota Kinabalu International Airport?

The cheapest airline flying from Mactan-Cebu International Airport to Kota Kinabalu International Airport is Philippines AirAsia (from HK$894) among 10 carriers operating this route. Based on Trip.com's latest 7-day flight data.

Philippines AirAsia
From HK$894
Cebu Pacific
From HK$919
Philippine Airlines
From HK$958
Scoot
From HK$1,015
AirAsia
From HK$1,364
Firefly Airline
From HK$1,454
Singapore Airlines
From HK$1,761
Malaysia Airlines
From HK$2,058
Jeju Air
From HK$2,204
China Airlines
From HK$2,228

Find more flights and airlines

What is the flight schedule from Mactan-Cebu International Airport to Kota Kinabalu International Airport?

Check the schedule for flights from Cebu to Kota Kinabalu and find the flight that best matches your travel plans.

Flight info.
Departure
Arrival
Weekly Schedule

  1. 5J564

    Mactan-Cebu International Airport

    6:55 AM

    CEB

    1h 30m

    Nonstop

    8:25 AM

    MNL

    - M T W T F S
    Search

  2. Z2501

    Ninoy Aquino International Airport

    10:55 PM

    MNL

    2h 10m

    Nonstop

    1:05 AM

    BKI

    S - T - T - S

  3. Z2764

    Mactan-Cebu International Airport

    7:55 AM

    CEB

    1h 20m

    Nonstop

    9:15 AM

    MNL

    S M T W T F S
    Search

  4. Z2501

    Ninoy Aquino International Airport

    10:55 PM

    MNL

    2h 10m

    Nonstop

    1:05 AM

    BKI

    S - T - T - S

  5. 5J2516

    Mactan-Cebu International Airport

    5:30 AM

    CEB

    1h 30m

    Nonstop

    7:00 AM

    MNL

    S - T - T - S
    Search

  6. Z2501

    Ninoy Aquino International Airport

    10:55 PM

    MNL

    2h 10m

    Nonstop

    1:05 AM

    BKI

    S - T - T - S

  7. 5J2504

    Mactan-Cebu International Airport

    2:55 AM

    CEB

    1h 35m

    Nonstop

    4:30 AM

    MNL

    S M T W T F S
    Search

  8. Z2501

    Ninoy Aquino International Airport

    10:55 PM

    MNL

    2h 10m

    Nonstop

    1:05 AM

    BKI

    S - T - T - S

  9. 5J554

    Mactan-Cebu International Airport

    2:10 AM

    CEB

    1h 35m

    Nonstop

    3:45 AM

    MNL

    S M T - T - -
    Search

  10. Z2501

    Ninoy Aquino International Airport

    10:55 PM

    MNL

    2h 10m

    Nonstop

    1:05 AM

    BKI

    S - T - T - S

  11. 5J576

    Mactan-Cebu International Airport

    3:20 AM

    CEB

    1h 35m

    Nonstop

    4:55 AM

    MNL

    S - - - - F S
    Search

  12. Z2501

    Ninoy Aquino International Airport

    10:55 PM

    MNL

    2h 10m

    Nonstop

    1:05 AM

    BKI

    S - T - T - S

  13. 5J584

    Mactan-Cebu International Airport

    1:40 AM

    CEB

    1h 30m

    Nonstop

    3:10 AM

    MNL

    S M T W T F -
    Search

  14. Z2501

    Ninoy Aquino International Airport

    10:55 PM

    MNL

    2h 10m

    Nonstop

    1:05 AM

    BKI

    S - T - T - S

  15. PR2858

    Mactan-Cebu International Airport

    12:35 AM

    CEB

    1h 20m

    Nonstop

    1:55 AM

    MNL

    S M T W T F S
    Search

  16. Z2501

    Ninoy Aquino International Airport

    10:55 PM

    MNL

    2h 10m

    Nonstop

    1:05 AM

    BKI

    S - T - T - S

  17. 5J2502

    Mactan-Cebu International Airport

    4:05 AM

    CEB

    1h 45m

    Nonstop

    5:50 AM

    MNL

    - - - - - - S
    Search

  18. Z2501

    Ninoy Aquino International Airport

    10:55 PM

    MNL

    2h 10m

    Nonstop

    1:05 AM

    BKI

    S - T - T - S

  19. 5J574

    Mactan-Cebu International Airport

    10:55 PM

    CEB

    1h 35m

    Nonstop

    12:30 AM

    MNL

    - - - W - F S
    Search

  20. Z2501

    Ninoy Aquino International Airport

    10:55 PM

    MNL

    2h 10m

    Nonstop

    1:05 AM

    BKI

    S - T - T - S
Find more flights and airlines

About Mactan-Cebu International Airport and Kota Kinabalu International Airport

Learn about Mactan-Cebu International Airport (CEB) and Kota Kinabalu International Airport (BKI) — including location, terminals, transportation, and travel tips.

Flight distance 1,001.23 km
Cheapest one-way ticket price HK$894
Cheapest return ticket price HK$1,736

FAQs for Mactan-Cebu International Airport to Kota Kinabalu International Airport Flights

  • What is the transportation method from the main airport to downtown in Kota Kinabalu?

    • The distance from Kota Kinabalu International Airport to downtown is about 7 km. It takes about 20 minutes by taxi.
  • One-way flights from Mactan-Cebu International Airport to Kota Kinabalu International Airport currently start from HK$894, and round-trip fares start from HK$1,736. The current lowest fare is a Philippines AirAsia flight departing on Sun, Nov 29; prices may vary depending on availability.
  • Based on Trip.com flight data for departures within the next 30 days with at most one stop, the average one-way price from Mactan-Cebu International Airport to Kota Kinabalu International Airport is HK$1,953. Prices may vary depending on the departure date, airline, and availability.
  • Enter Mactan-Cebu International Airport and Kota Kinabalu International Airport, select your departure date and number of passengers, then compare flights by price, flight duration, and baggage allowance. Once you've chosen a fare, review the change and refund rules, fill in passenger details, and pay to receive your booking confirmation.

Popular Destinations

Note: Prices shown on this page are the lowest estimated prices found in the last 24 hours and include all taxes and fees.

Book with no extra fees

Prices displayed on this page are all-inclusive (incl. taxes, fuel surcharges, Civil Aviation Development Fund, etc.), and all fees are clearly shown before payment. Charges for checked baggage, onboard meals, Wi-Fi, and other optional services may also appear in the flight cards where applicable.

Real-time pricing updates

Prices, availability, and travel information on this page have been updated within the last 24 hours, and for many routes the data may refresh in real time. The more popular the route, the more accurate and up-to-date the data.

Change & Cancellation Policy

Trip.com shows the change and cancellation rules for each ticket during the booking process, including all related fees and conditions. Please refer to the following scenarios:
Voluntary cancellation/change:
To request a change or cancellation, go to the flight bookings page, select the option to change or cancel your booking, choose the relevant passengers and flight segment, and submit your request. Please note that additional charges may apply based on the airline’s fare rules.
Cancellation/change due to a flight schedule change:
If your flight has been rescheduled and you would like to change or cancel your ticket, you can submit an involuntary cancellation request. For full details of change and cancellation policies, please refer to the customer support pages.