App
Customer Support
JPY
Find Bookings
Trip.com
>
Flights
>
Flights to Greece
>
Flights to Mykonos
>
Flights from Heraklion to Mykonos
Worldwide Coverage
Worldwide Coverage
Flights to over 5,000 cities
One-stop Service Guarantee
One-stop Service Guarantee
Price guaranteed upon confirmed payment, booking guaranteed once tickets issued
Secure Payment
Secure Payment
Convenient & reliable booking and payment system

Cheap flight deals from Heraklion to Mykonos Starting at JPY 6,440

We've found these cheap flights for you. You can book one-way or round-trip flight tickets.

  • One way
  • Round-trip
      • HER09:45 pm
        10h 15m
        1 stop
        JMK08:00 am
        Thu, Feb 27|Heraklion - Mykonos|SKY express
        JPY 6,440JPY 12,356
        48% OFF
        48% OFF
        JPY 12,356JPY 6,440

        Choose SKY express flights from Heraklion to Mykonos. The one-way connecting flight with SKY express departs from Heraklion International Airport on Thu, Feb 27, arriving at Mykonos Airport. One-way Prices start from JPY 6,440 including taxes and charges.

      • HER09:45 pm
        13h 30m
        1 stop
        JMK11:15 am
        Sat, Mar 22|Heraklion - Mykonos|SKY express
        JPY 6,482JPY 12,356
        48% OFF
        48% OFF
        JPY 12,356JPY 6,482

        Choose SKY express flights from Heraklion to Mykonos. The one-way connecting flight with SKY express departs from Heraklion International Airport on Sat, Mar 22, arriving at Mykonos Airport. One-way Prices start from JPY 6,482 including taxes and charges.

      • HER09:45 pm
        10h 15m
        1 stop
        JMK08:00 am
        Thu, Feb 20|Heraklion - Mykonos|SKY express
        JPY 6,627JPY 12,356
        46% OFF
        46% OFF
        JPY 12,356JPY 6,627

        Choose SKY express flights from Heraklion to Mykonos. The one-way connecting flight with SKY express departs from Heraklion International Airport on Thu, Feb 20, arriving at Mykonos Airport. One-way Prices start from JPY 6,627 including taxes and charges.

      • HER09:45 pm
        13h 30m
        1 stop
        JMK11:15 am
        Wed, Feb 19|Heraklion - Mykonos|SKY express
        JPY 7,209
        JPY 7,209

        Choose SKY express flights from Heraklion to Mykonos. The one-way connecting flight with SKY express departs from Heraklion International Airport on Wed, Feb 19, arriving at Mykonos Airport. One-way Prices start from JPY 7,209 including taxes and charges.

      • HER09:45 pm
        10h 15m
        1 stop
        JMK08:00 am
        Tue, Mar 11|Heraklion - Mykonos|SKY express
        JPY 7,251
        JPY 7,251

        Choose SKY express flights from Heraklion to Mykonos. The one-way connecting flight with SKY express departs from Heraklion International Airport on Tue, Mar 11, arriving at Mykonos Airport. One-way Prices start from JPY 7,251 including taxes and charges.

      • HER09:45 pm
        10h 15m
        1 stop
        JMK08:00 am
        Thu, Mar 20|Heraklion - Mykonos|SKY express
        JPY 7,853
        JPY 7,853

        Choose SKY express flights from Heraklion to Mykonos. The one-way connecting flight with SKY express departs from Heraklion International Airport on Thu, Mar 20, arriving at Mykonos Airport. One-way Prices start from JPY 7,853 including taxes and charges.

      • HER09:45 pm
        13h 30m
        1 stop
        JMK11:15 am
        Wed, Mar 5|Heraklion - Mykonos|SKY express
        JPY 7,978
        JPY 7,978

        Choose SKY express flights from Heraklion to Mykonos. The one-way connecting flight with SKY express departs from Heraklion International Airport on Wed, Mar 5, arriving at Mykonos Airport. One-way Prices start from JPY 7,978 including taxes and charges.

      • HER09:45 pm
        13h 30m
        1 stop
        JMK11:15 am
        Wed, Mar 26|Heraklion - Mykonos|SKY express
        JPY 8,019
        JPY 8,019

        Choose SKY express flights from Heraklion to Mykonos. The one-way connecting flight with SKY express departs from Heraklion International Airport on Wed, Mar 26, arriving at Mykonos Airport. One-way Prices start from JPY 8,019 including taxes and charges.

      • HER12:50 pm
        20h 45m
        1 stop
        JMK09:35 am
        Thu, Apr 3|Heraklion - Mykonos|Volotea
        JPY 8,082
        JPY 8,082

        Choose Volotea flights from Heraklion to Mykonos. The one-way connecting flight with Volotea departs from Heraklion International Airport on Thu, Apr 3, arriving at Mykonos Airport. One-way Prices start from JPY 8,082 including taxes and charges.

      • HER02:00 pm
        7h 20m
        1 stop
        JMK09:20 pm
        Sat, May 3|Heraklion - Mykonos|SKY express
        JPY 8,726
        JPY 8,726

        Choose SKY express flights from Heraklion to Mykonos. The one-way connecting flight with SKY express departs from Heraklion International Airport on Sat, May 3, arriving at Mykonos Airport. One-way Prices start from JPY 8,726 including taxes and charges.

      • HER01:00 pm
        3h 5m
        Nonstop
        JMK02:00 pm
        Wed, Feb 26|Heraklion - Mykonos|SKY express
        Find More Flights
        Find More Flights

Crossed out prices are calculated based on the average price of the corresponding route on Trip.com.

Heraklion to Mykonos Flight Time

Flight info.
Departure
Arrival
Weekly Schedule

  1. A3319

    Aegean Airlines

    06:25 pm

    HER

    0.8h

    07:15 pm

    ATH

    SMTWTFS
    Search

  2. A3370

    Aegean Airlines

    04:40 am

    ATH

    0.8h

    05:25 am

    JMK

    SMTWTFS

  3. GQ215

    SKY express

    06:50 pm

    HER

    0.8h

    07:40 pm

    ATH

    SMTWTFS
    Search

  4. GQ230

    SKY express

    07:35 am

    ATH

    0.8h

    08:20 am

    JMK

    SMTWTFS

  5. A3303

    Aegean Airlines

    08:10 am

    HER

    0.8h

    09:00 am

    ATH

    SMTWTFS
    Search

  6. A3374

    Aegean Airlines

    10:40 am

    ATH

    0.7h

    11:20 am

    JMK

    SMTWTFS

  7. A3303

    Aegean Airlines

    08:10 am

    HER

    0.8h

    09:00 am

    ATH

    SMTWTFS
    Search

  8. A3370

    Aegean Airlines

    04:40 am

    ATH

    0.8h

    05:25 am

    JMK

    SMTWTFS

  9. GQ211

    SKY express

    08:40 am

    HER

    0.8h

    09:30 am

    ATH

    SMTWTFS
    Search

  10. GQ230

    SKY express

    07:35 am

    ATH

    0.8h

    08:20 am

    JMK

    SMTWTFS

  11. A3321

    Aegean Airlines

    09:50 pm

    HER

    0.8h

    10:40 pm

    ATH

    SMTWTFS
    Search

  12. GQ230

    SKY express

    07:35 am

    ATH

    0.8h

    08:20 am

    JMK

    SMTWTFS

  13. GQ217

    SKY express

    10:25 pm

    HER

    0.8h

    11:15 pm

    ATH

    SMTWTFS
    Search

  14. GQ230

    SKY express

    07:35 am

    ATH

    0.8h

    08:20 am

    JMK

    SMTWTFS

  15. A3323

    Aegean Airlines

    11:20 pm

    HER

    0.8h

    12:10 am

    ATH

    SMTWTFS
    Search

  16. A3370

    Aegean Airlines

    04:40 am

    ATH

    0.8h

    05:25 am

    JMK

    SMTWTFS
Find more flights and airlines

When is the cheapest time to fly from Heraklion to Mykonos?

We monitor flight fares to help you find the best deals effortlessly

Displayed prices are calculated based on the cheapest average weekly prices of the corresponding route on Trip.com.

Frequently Asked Questions

  • When are flight tickets from Heraklion (HER) to Mykonos (JMK) the cheapest?

    Airlines adjust prices for flights from Heraklion to Mykonos based on the departure date and time of your selection. By analyzing data from all airlines, we've discovered that on Trip.com, you can find the lowest flight prices on Tuesdays, Wednesdays, and Saturdays.

  • How much do flights from Heraklion (HER) to Mykonos (JMK) cost?

    According to Trip.com's data, the lowest price is around JPY 22,167.

How to find a cheap flight from Heraklion to Mykonos

Wait until the last minute and flight costs are often sky-high. Plan ahead, book the right way, and your savings can soar. We have loads of saving tips to help you find a cheap flight from Heraklion to Mykonos. Book your flights at the right time and save more.
1
Book Early
Once prices are gone, they're gone. Lock in deals while you can!
2
Compare Flight Prices
Compare prices on travel agency and airline websites.
3
Look Out for Deals
Check airline and travel agency websites for latest flight deals
4
Check One-way Fares
Buying two cheap one-way flights can sometimes be a better deal than a round-trip.
5
Try Different Dates
Flying during the week, early in the morning, or late at night can help save money.
6
Use the Trip.com App
Save up to £10 per person when booking your flights on Trip.com

Flight Info | Heraklion to Mykonos

Cheapest nonstop flight priceJPY 6,440
Off-season for travelFebruary
Peak season for travelNovember
Flight distance233.47 km
Popular airlineAegean Airlines

Contact Us

About

Other Services

Payment Methods
Our Partners
Copyright © 2025 Trip.com Travel Singapore Pte. Ltd. All rights reserved
Site Operator: Trip.com Travel Singapore Pte. Ltd.