App
Customer Support
PHP
Find Bookings
Trip.com
>
Flights
>
Flights to Philippines
>
Flights to Mimaropa
>
Flights to El Nido
>
Manila to El Nido flight
>
Ninoy Aquino International Airport to El Nido flight
Worldwide Coverage
Worldwide Coverage
Flights to over 5,000 cities
One-stop Service Guarantee
One-stop Service Guarantee
Price guaranteed upon confirmed payment, booking guaranteed once tickets issued
Secure Payment
Secure Payment
Convenient & reliable booking and payment system

Cheap Flights from Ninoy Aquino International Airport to El Nido

Search for flights from Ninoy Aquino International Airport to El Nido and check out affordable one-way and round-trip options.

  • One way
  • Round-trip
      • Cheapest nonstop
        MNL4:45 AM
        1h 30m
        Nonstop
        ENI6:15 AM
        Manila - El Nido|Wed, May 7|AirSWIFT AirLine
        PHP 4,931PHP 9,616
        49% OFF
        49% OFF
        PHP 9,616PHP 4,931

        Choose AirSWIFT AirLine flights from Manila to El Nido. The one-way direct flight with AirSWIFT AirLine departs from Ninoy Aquino International Airport on Wed, May 7, arriving at El Nido Airport. One-way Prices start from PHP 4,931 including taxes and charges.

      • MNL4:45 AM
        1h 30m
        Nonstop
        ENI6:15 AM
        Manila - El Nido|Sat, May 3|AirSWIFT AirLine
        PHP 5,089PHP 9,616
        47% OFF
        47% OFF
        PHP 9,616PHP 5,089

        Choose AirSWIFT AirLine flights from Manila to El Nido. The one-way direct flight with AirSWIFT AirLine departs from Ninoy Aquino International Airport on Sat, May 3, arriving at El Nido Airport. One-way Prices start from PHP 5,089 including taxes and charges.

      • MNL5:10 AM
        1h 30m
        Nonstop
        ENI6:40 AM
        Manila - El Nido|Sat, May 17|AirSWIFT AirLine
        PHP 5,200PHP 9,616
        46% OFF
        46% OFF
        PHP 9,616PHP 5,200

        Choose AirSWIFT AirLine flights from Manila to El Nido. The one-way direct flight with AirSWIFT AirLine departs from Ninoy Aquino International Airport on Sat, May 17, arriving at El Nido Airport. One-way Prices start from PHP 5,200 including taxes and charges.

      • MNL5:15 AM
        1h 30m
        Nonstop
        ENI6:45 AM
        Manila - El Nido|Sat, May 31|AirSWIFT AirLine
        PHP 5,207
        PHP 5,207

        Choose AirSWIFT AirLine flights from Manila to El Nido. The one-way direct flight with AirSWIFT AirLine departs from Ninoy Aquino International Airport on Sat, May 31, arriving at El Nido Airport. One-way Prices start from PHP 5,207 including taxes and charges.

      • MNL4:45 AM
        1h 30m
        Nonstop
        ENI6:15 AM
        Manila - El Nido|Tue, May 6|AirSWIFT AirLine
        PHP 6,306
        PHP 6,306

        Choose AirSWIFT AirLine flights from Manila to El Nido. The one-way direct flight with AirSWIFT AirLine departs from Ninoy Aquino International Airport on Tue, May 6, arriving at El Nido Airport. One-way Prices start from PHP 6,306 including taxes and charges.

      • MNL5:10 AM
        1h 30m
        Nonstop
        ENI6:40 AM
        Manila - El Nido|Sun, May 11|AirSWIFT AirLine
        PHP 6,306
        PHP 6,306

        Choose AirSWIFT AirLine flights from Manila to El Nido. The one-way direct flight with AirSWIFT AirLine departs from Ninoy Aquino International Airport on Sun, May 11, arriving at El Nido Airport. One-way Prices start from PHP 6,306 including taxes and charges.

      • MNL4:45 AM
        1h 30m
        Nonstop
        ENI6:15 AM
        Manila - El Nido|Sun, May 4|AirSWIFT AirLine
        PHP 6,314
        PHP 6,314

        Choose AirSWIFT AirLine flights from Manila to El Nido. The one-way direct flight with AirSWIFT AirLine departs from Ninoy Aquino International Airport on Sun, May 4, arriving at El Nido Airport. One-way Prices start from PHP 6,314 including taxes and charges.

      • MNL4:45 AM
        1h 30m
        Nonstop
        ENI6:15 AM
        Manila - El Nido|Mon, May 5|AirSWIFT AirLine
        PHP 6,330
        PHP 6,330

        Choose AirSWIFT AirLine flights from Manila to El Nido. The one-way direct flight with AirSWIFT AirLine departs from Ninoy Aquino International Airport on Mon, May 5, arriving at El Nido Airport. One-way Prices start from PHP 6,330 including taxes and charges.

      • MNL5:10 AM
        1h 30m
        Nonstop
        ENI6:40 AM
        Manila - El Nido|Wed, May 28|AirSWIFT AirLine
        PHP 6,361
        PHP 6,361

        Choose AirSWIFT AirLine flights from Manila to El Nido. The one-way direct flight with AirSWIFT AirLine departs from Ninoy Aquino International Airport on Wed, May 28, arriving at El Nido Airport. One-way Prices start from PHP 6,361 including taxes and charges.

      • MNL5:15 AM
        1h 30m
        Nonstop
        ENI6:45 AM
        Manila - El Nido|Tue, May 13|AirSWIFT AirLine
        PHP 6,361
        PHP 6,361

        Choose AirSWIFT AirLine flights from Manila to El Nido. The one-way direct flight with AirSWIFT AirLine departs from Ninoy Aquino International Airport on Tue, May 13, arriving at El Nido Airport. One-way Prices start from PHP 6,361 including taxes and charges.

      • MNL1:00 PM
        3h 5m
        Nonstop
        ENI2:00 PM
        Manila - El Nido|Sun, Apr 6|AirSWIFT AirLine
        Find More Flights
        Find More Flights

Crossed out prices are calculated based on the average price of the corresponding route on Trip.com.

Selected Airlines from Ninoy Aquino International Airport to El Nido

See which airlines fly from Ninoy Aquino International Airport to El Nido. Find the airline that best meets your travel needs by comparing prices and treat yourself to an enjoyable journey.
AirSWIFT AirLine logoAirSWIFT AirLine

There are 1 airport(s) in El Nido. Discover the top routes now!

Learn about different airports in El Nido, find the best flight and transfer options, and plan your journey.

  • 0 km from downtown El Nido
    El Nido ENI Airport
    Tickets From
    PHP 6,361

Flight Schedule from Ninoy Aquino International Airport to El Nido

Check the schedule for flights from Ninoy Aquino International Airport to El Nido and find the flight that best matches your travel plans.

Flight info.
Departure
Arrival
Weekly Schedule

  1. T6126

    AirSWIFT AirLine

    10:00 AM

    MNL

    1.5h

    Nonstop

    11:30 AM

    ENI

    SMTWTFS
    Search

  2. T6142

    AirSWIFT AirLine

    2:00 PM

    MNL

    1.5h

    Nonstop

    3:30 PM

    ENI

    SMTWTFS
    Search

  3. T6110

    AirSWIFT AirLine

    4:45 AM

    MNL

    1.5h

    Nonstop

    6:15 AM

    ENI

    SMTWTFS
    Search

  4. T6112

    AirSWIFT AirLine

    5:15 AM

    MNL

    1.5h

    Nonstop

    6:45 AM

    ENI

    SMTWTFS
    Search

  5. T6114

    AirSWIFT AirLine

    5:55 AM

    MNL

    1.5h

    Nonstop

    7:25 AM

    ENI

    SMTWTFS
    Search

  6. T6172

    AirSWIFT AirLine

    6:00 PM

    MNL

    1.5h

    Nonstop

    7:30 PM

    ENI

    SMTWTFS
    Search
Find more flights and airlines

Flight Info of Flights from Ninoy Aquino International Airport to El Nido

Cheapest round-trip ticket pricePHP 7,822
Cheapest one-way flight pricePHP 4,930
Off-season for travelMarch
Peak season for travelDecember

FAQs for Ninoy Aquino International Airport to El Nido Flights

  • What is the transportation method from the main airport to downtown in El Nido?

    • The distance from El Nido ENI Airport to downtown is about 5 km. It takes about 20 minutes by taxi.

Contact Us

About

Other Services

Payment Methods
Our Partners
Copyright © 2025 Trip.com Travel Singapore Pte. Ltd. All rights reserved
Site Operator: Trip.com Travel Singapore Pte. Ltd.